Functional Genomics
A.Y. 2024/2025
Learning objectives
Now that most genomes of model organisms have been sequenced and annotated in detail, reverse genetics approaches are being used to experimentally determine the function of genes encoded by genomes. Most gene functions up until today are largely based on bioinformatics-based predictions. However, those that have been experimentally analysed, especially regulatory genes, reveal a complex picture of genes having multiple and often overlapping functions. In this complex framework, the course intends to provide the students with deep knowledge about the latest technologies and genome wide approaches to study gene functions in model organisms and to unravel complex regulatory pathways.
Expected learning outcomes
Students will become familiar with approaches used to study gene functions using state-of-the-art genomics, transcriptomics and proteomics approaches. The course commences with genome analysis and reverse genetics approaches applied to study gene functions. Subsequently, transcriptomics and protein analysis will be used to study transcription factors that control regulatory pathways. Students will gain competences in understanding the different methodologies used for gene function analysis in complex biological systems.
BY the end of the course, students will be able to design experimental strategies to study gene functions in prokaryotic and eukaryotic model organisms.
BY the end of the course, students will be able to design experimental strategies to study gene functions in prokaryotic and eukaryotic model organisms.
Lesson period: First semester
Assessment methods: Esame
Assessment result: voto verbalizzato in trentesimi
Single course
This course can be attended as a single course.
Course syllabus and organization
Single session
Responsible
Lesson period
First semester
Course syllabus
Whole genome sequencing
Genome annotation
Gene family analysis
Reverse genetics strategies in prokaryotes and eukaryotes
Genome editing strategies
Transcriptomics (incl. spatial)
Small non-coding RNA function and their analysis
Regulatory pathway analysis
Proteomics strategies
Protein interactions and complex formation
Protein analysis in living cells.
Genome annotation
Gene family analysis
Reverse genetics strategies in prokaryotes and eukaryotes
Genome editing strategies
Transcriptomics (incl. spatial)
Small non-coding RNA function and their analysis
Regulatory pathway analysis
Proteomics strategies
Protein interactions and complex formation
Protein analysis in living cells.
Prerequisites for admission
Good basic knowledge of Molecular Biology and Genetics.
Teaching methods
Frontal lectures. At the end of the course, there will be an additional question time during which students can ask for extra explanations regarding all the topics that were discussed during the lessons.
Teaching Resources
Scientific papers and reviews will be presented during lectures and all materials will be uploaded on the Ariel website, lecture attendance is strongly encouraged.
Assessment methods and Criteria
Learning assessment will be through a written exam at the end of the course. The examination will consist of 6 open questions of which, students must answer 5. Each question contributes equally to the final score. The students will have 2 hours to answer the question.
BIO/18 - GENETICS - University credits: 6
Lectures: 48 hours
Educational website(s)
Professor(s)
Reception:
Thursday 14.00 - 17.00
Via Celoria 26, Tower B, 2nd floor